BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F03SP1|AL428414
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1531 1826 0.0
>3x_Contig1531
Length = 8774
Score = 1826 bits (921), Expect = 0.0
Identities = 928/929 (99%), Gaps = 1/929 (0%)
Strand = Plus / Minus
Query: 1 acttcgagaagagaaaatatagttatcattaatcataatccttttttgcatgatgtctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6633 acttcgagaagagaaaatatagttatcattaatcataatccttttttgcatgatgtctac 6574
Query: 61 cgatacgatgtattttaatagctcacgatctatgccgagccatagaggccgtcatcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6573 cgatacgatgtattttaatagctcacgatctatgccgagccatagaggccgtcatcagaa 6514
Query: 121 acaaacacgattgcaaaaacctgataggcgaatggagaaccagataaagcttagaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6513 acaaacacgattgcaaaaacctgataggcgaatggagaaccagataaagcttagaaagca 6454
Query: 181 gcagtctgcagaacctcctgtcgtttccaatcaggatcatgagactgctatgtcacaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6453 gcagtctgcagaacctcctgtcgtttccaatcaggatcatgagactgctatgtcacaatt 6394
Query: 241 tgcttactctggttatggaaatcaaggaacttcgctgaccactgcttcatctgaggcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6393 tgcttactctggttatggaaatcaaggaacttcgctgaccactgcttcatctgaggcgat 6334
Query: 301 ggataccatgggttttgtatcagatgacttgaagcaactactttctatgacagattcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6333 ggataccatgggttttgtatcagatgacttgaagcaactactttctatgacagattcaaa 6274
Query: 361 caaaaaagagaacagctctccgcaacttaaccacaaccaacaacaacaacagccactgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6273 caaaaaagagaacagctctccgcaacttaaccacaaccaacaacaacaacagccactgcc 6214
Query: 421 tgtttcgaactcaccaagattgagcccatccggaacttaccagcaatcccctttaccccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6213 tgtttcgaactcaccaagattgagcccatccggaacttaccagcaatcccctttaccccc 6154
Query: 481 caaccaaggactctacggacctatgatggtccctccaccatttttaatgagcaatgtgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6153 caaccaaggactctacggacctatgatggtccctccaccatttttaatgagcaatgtgcc 6094
Query: 541 aaaactaggtccacatccctacgctggtattgcaaatggtcctggtatgttgcctatgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6093 aaaactaggtccacatccctacgctggtattgcaaatggtcctggtatgttgcctatgta 6034
Query: 601 tgttcctatgaatgctggtcgtccaatcaaccaacctcctgcataccctcaagcaatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6033 tgttcctatgaatgctggtcgtccaatcaaccaacctcctgcataccctcaagcaatgta 5974
Query: 661 caatgcgactcaccaacaaggtattgcattcccaccgcaacaactttttcaacatcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5973 caatgcgactcaccaacaaggtattgcattcccaccgcaacaactttttcaacatcaaca 5914
Query: 721 attacattcatcacagccacaaccacaacaagtccaacaagttcagcaacaaaaactgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5913 attacattcatcacagccacaaccacaacaagtccaacaagttcagcaacaaaaactgca 5854
Query: 781 atctccagctccaaataatgcacagattacaaaatcatctgtggagccgcaaactgttgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5853 atctccagctccaaataatgcacagattacaaaatcatctgtggagccgcaaactgttgt 5794
Query: 841 aggtaacacagaacaaaccaaacaacctgcatctgacaacaaacagaatttcaaaatctc 900
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5793 aggtaacacagaacaaaccaaacaacctgcatctgacaacaaacag-atttcaaaatctc 5735
Query: 901 ccaaagaagaatctcgtcaacaacgttct 929
|||||||||||||||||||||||||||||
Sbjct: 5734 ccaaagaagaatctcgtcaacaacgttct 5706
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7421
Number of Sequences: 1807
Number of extensions: 7421
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)